Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.27■□□□□ 0.99
Tgfbr3O88393 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfbr3O88393 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.26■□□□□ 0.99
Tgfbr3O88393 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfbr3O88393 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfbr3O88393 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tgfbr3O88393 Gm10232-201ENSMUST00000089221 720 ntBASIC21.26■□□□□ 0.99
Tgfbr3O88393 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.26■□□□□ 0.99
Tgfbr3O88393 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Tgfbr3O88393 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.25■□□□□ 0.99
Tgfbr3O88393 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tgfbr3O88393 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tgfbr3O88393 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tgfbr3O88393 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tgfbr3O88393 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tgfbr3O88393 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Tgfbr3O88393 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tgfbr3O88393 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tgfbr3O88393 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Tgfbr3O88393 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfbr3O88393 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfbr3O88393 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfbr3O88393 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfbr3O88393 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfbr3O88393 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.22■□□□□ 0.99
Tgfbr3O88393 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfbr3O88393 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfbr3O88393 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfbr3O88393 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfbr3O88393 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tgfbr3O88393 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfbr3O88393 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfbr3O88393 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfbr3O88393 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfbr3O88393 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tgfbr3O88393 Etf1-202ENSMUST00000180351 108 ntBASIC21.2■□□□□ 0.98
Tgfbr3O88393 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.2■□□□□ 0.98
Tgfbr3O88393 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfbr3O88393 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfbr3O88393 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfbr3O88393 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tgfbr3O88393 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfbr3O88393 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Tgfbr3O88393 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tgfbr3O88393 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tgfbr3O88393 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tgfbr3O88393 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tgfbr3O88393 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.16■□□□□ 0.98
Tgfbr3O88393 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.16■□□□□ 0.98
Tgfbr3O88393 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.16■□□□□ 0.98
Tgfbr3O88393 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tgfbr3O88393 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tgfbr3O88393 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tgfbr3O88393 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tgfbr3O88393 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tgfbr3O88393 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tgfbr3O88393 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.14■□□□□ 0.98
Tgfbr3O88393 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tgfbr3O88393 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.14■□□□□ 0.97
Tgfbr3O88393 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tgfbr3O88393 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfbr3O88393 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tgfbr3O88393 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Tgfbr3O88393 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Tgfbr3O88393 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.13■□□□□ 0.97
Tgfbr3O88393 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfbr3O88393 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfbr3O88393 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tgfbr3O88393 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfbr3O88393 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfbr3O88393 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfbr3O88393 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfbr3O88393 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfbr3O88393 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfbr3O88393 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfbr3O88393 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfbr3O88393 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.1■□□□□ 0.97
Tgfbr3O88393 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
Tgfbr3O88393 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfbr3O88393 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Tgfbr3O88393 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tgfbr3O88393 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tgfbr3O88393 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.09■□□□□ 0.97
Tgfbr3O88393 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Tgfbr3O88393 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tgfbr3O88393 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tgfbr3O88393 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfbr3O88393 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.08■□□□□ 0.97
Tgfbr3O88393 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Tgfbr3O88393 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfbr3O88393 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfbr3O88393 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfbr3O88393 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfbr3O88393 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms