Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prrt1O35449 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prrt1O35449 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Prrt1O35449 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prrt1O35449 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prrt1O35449 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Prrt1O35449 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prrt1O35449 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prrt1O35449 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prrt1O35449 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Prrt1O35449 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.72■□□□□ 0.59
Prrt1O35449 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prrt1O35449 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prrt1O35449 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prrt1O35449 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.71■□□□□ 0.59
Prrt1O35449 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prrt1O35449 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.7■□□□□ 0.58
Prrt1O35449 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.7■□□□□ 0.58
Prrt1O35449 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Prrt1O35449 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrt1O35449 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrt1O35449 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrt1O35449 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.69■□□□□ 0.58
Prrt1O35449 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Prrt1O35449 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.69■□□□□ 0.58
Prrt1O35449 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Prrt1O35449 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prrt1O35449 Gm24970-201ENSMUST00000175582 82 ntBASIC18.68■□□□□ 0.58
Prrt1O35449 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prrt1O35449 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prrt1O35449 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prrt1O35449 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prrt1O35449 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prrt1O35449 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrt1O35449 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrt1O35449 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrt1O35449 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prrt1O35449 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrt1O35449 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrt1O35449 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prrt1O35449 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Prrt1O35449 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prrt1O35449 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prrt1O35449 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Prrt1O35449 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prrt1O35449 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prrt1O35449 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.65■□□□□ 0.58
Prrt1O35449 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prrt1O35449 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prrt1O35449 Zfp131-205ENSMUST00000223812 663 ntBASIC18.64■□□□□ 0.57
Prrt1O35449 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.64■□□□□ 0.57
Prrt1O35449 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prrt1O35449 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prrt1O35449 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.63■□□□□ 0.57
Prrt1O35449 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prrt1O35449 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.63■□□□□ 0.57
Prrt1O35449 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prrt1O35449 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prrt1O35449 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.62■□□□□ 0.57
Prrt1O35449 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prrt1O35449 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Prrt1O35449 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Prrt1O35449 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prrt1O35449 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prrt1O35449 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prrt1O35449 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.6■□□□□ 0.57
Prrt1O35449 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Prrt1O35449 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prrt1O35449 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prrt1O35449 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prrt1O35449 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.59■□□□□ 0.57
Prrt1O35449 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prrt1O35449 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prrt1O35449 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.59■□□□□ 0.57
Prrt1O35449 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prrt1O35449 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prrt1O35449 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prrt1O35449 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prrt1O35449 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.58■□□□□ 0.56
Prrt1O35449 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Prrt1O35449 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prrt1O35449 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prrt1O35449 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Prrt1O35449 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prrt1O35449 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prrt1O35449 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prrt1O35449 Gm9397-201ENSMUST00000200125 605 ntBASIC18.56■□□□□ 0.56
Prrt1O35449 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms