Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Efnb3O35393 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Efnb3O35393 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Efnb3O35393 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Efnb3O35393 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Efnb3O35393 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Efnb3O35393 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.42■□□□□ 0.38
Efnb3O35393 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.42■□□□□ 0.38
Efnb3O35393 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.42■□□□□ 0.38
Efnb3O35393 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Efnb3O35393 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Efnb3O35393 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Efnb3O35393 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Efnb3O35393 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Efnb3O35393 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Efnb3O35393 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.41■□□□□ 0.38
Efnb3O35393 Gm6821-201ENSMUST00000107540 542 ntBASIC17.41■□□□□ 0.38
Efnb3O35393 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.41■□□□□ 0.38
Efnb3O35393 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Efnb3O35393 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Efnb3O35393 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Efnb3O35393 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Efnb3O35393 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.4■□□□□ 0.38
Efnb3O35393 Gm8503-201ENSMUST00000118131 455 ntBASIC17.4■□□□□ 0.38
Efnb3O35393 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Efnb3O35393 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.39■□□□□ 0.38
Efnb3O35393 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Efnb3O35393 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Efnb3O35393 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.39■□□□□ 0.37
Efnb3O35393 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Efnb3O35393 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Efnb3O35393 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Efnb3O35393 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Efnb3O35393 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Efnb3O35393 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Efnb3O35393 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Efnb3O35393 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Efnb3O35393 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Efnb3O35393 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Efnb3O35393 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Efnb3O35393 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Efnb3O35393 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Efnb3O35393 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Efnb3O35393 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Efnb3O35393 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.36■□□□□ 0.37
Efnb3O35393 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.36■□□□□ 0.37
Efnb3O35393 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Efnb3O35393 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Efnb3O35393 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Efnb3O35393 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Efnb3O35393 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.35■□□□□ 0.37
Efnb3O35393 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.35■□□□□ 0.37
Efnb3O35393 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Efnb3O35393 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Efnb3O35393 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Efnb3O35393 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Efnb3O35393 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Efnb3O35393 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.33■□□□□ 0.37
Efnb3O35393 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Efnb3O35393 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Efnb3O35393 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Efnb3O35393 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Efnb3O35393 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Efnb3O35393 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.31■□□□□ 0.36
Efnb3O35393 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Efnb3O35393 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Efnb3O35393 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Efnb3O35393 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Efnb3O35393 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Efnb3O35393 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Efnb3O35393 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.29■□□□□ 0.36
Efnb3O35393 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Efnb3O35393 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Efnb3O35393 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.28■□□□□ 0.36
Efnb3O35393 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.28■□□□□ 0.36
Efnb3O35393 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Efnb3O35393 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Efnb3O35393 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.27■□□□□ 0.36
Efnb3O35393 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Efnb3O35393 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Efnb3O35393 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Efnb3O35393 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Efnb3O35393 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.26■□□□□ 0.35
Efnb3O35393 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Efnb3O35393 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Efnb3O35393 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms