Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufb11O09111 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufb11O09111 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufb11O09111 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufb11O09111 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.86■□□□□ 0.45
Ndufb11O09111 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Ndufb11O09111 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.85■□□□□ 0.45
Ndufb11O09111 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndufb11O09111 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndufb11O09111 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndufb11O09111 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndufb11O09111 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ndufb11O09111 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufb11O09111 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ndufb11O09111 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ndufb11O09111 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ndufb11O09111 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ndufb11O09111 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ndufb11O09111 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ndufb11O09111 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndufb11O09111 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ndufb11O09111 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndufb11O09111 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ndufb11O09111 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufb11O09111 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufb11O09111 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufb11O09111 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufb11O09111 Iqck-206ENSMUST00000208658 2891 ntBASIC17.81■□□□□ 0.44
Ndufb11O09111 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufb11O09111 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufb11O09111 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufb11O09111 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufb11O09111 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufb11O09111 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufb11O09111 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ndufb11O09111 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufb11O09111 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Ndufb11O09111 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufb11O09111 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufb11O09111 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufb11O09111 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ndufb11O09111 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndufb11O09111 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndufb11O09111 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndufb11O09111 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndufb11O09111 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ndufb11O09111 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ndufb11O09111 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndufb11O09111 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndufb11O09111 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndufb11O09111 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Ndufb11O09111 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndufb11O09111 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.77■□□□□ 0.43
Ndufb11O09111 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndufb11O09111 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ndufb11O09111 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Ndufb11O09111 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Ndufb11O09111 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.76■□□□□ 0.43
Ndufb11O09111 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ndufb11O09111 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndufb11O09111 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufb11O09111 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufb11O09111 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufb11O09111 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufb11O09111 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufb11O09111 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufb11O09111 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ndufb11O09111 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndufb11O09111 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ndufb11O09111 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndufb11O09111 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ndufb11O09111 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufb11O09111 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufb11O09111 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ndufb11O09111 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ndufb11O09111 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufb11O09111 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufb11O09111 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.72■□□□□ 0.43
Ndufb11O09111 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufb11O09111 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.72■□□□□ 0.43
Ndufb11O09111 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ndufb11O09111 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufb11O09111 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufb11O09111 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Ndufb11O09111 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufb11O09111 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufb11O09111 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufb11O09111 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufb11O09111 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ndufb11O09111 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufb11O09111 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufb11O09111 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ndufb11O09111 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms