Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ercc2O08811 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ercc2O08811 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.66■■□□□ 1.22
Ercc2O08811 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ercc2O08811 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.66■■□□□ 1.22
Ercc2O08811 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Ercc2O08811 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ercc2O08811 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.65■■□□□ 1.22
Ercc2O08811 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.65■■□□□ 1.22
Ercc2O08811 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ercc2O08811 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ercc2O08811 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ercc2O08811 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ercc2O08811 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ercc2O08811 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ercc2O08811 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ercc2O08811 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ercc2O08811 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ercc2O08811 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ercc2O08811 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ercc2O08811 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.63■■□□□ 1.21
Ercc2O08811 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ercc2O08811 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ercc2O08811 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.62■■□□□ 1.21
Ercc2O08811 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ercc2O08811 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ercc2O08811 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ercc2O08811 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ercc2O08811 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ercc2O08811 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ercc2O08811 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ercc2O08811 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.61■■□□□ 1.21
Ercc2O08811 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.61■■□□□ 1.21
Ercc2O08811 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ercc2O08811 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ercc2O08811 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ercc2O08811 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ercc2O08811 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ercc2O08811 Gm14523-201ENSMUST00000117260 558 ntBASIC22.6■■□□□ 1.21
Ercc2O08811 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ercc2O08811 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.6■■□□□ 1.21
Ercc2O08811 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ercc2O08811 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ercc2O08811 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Ercc2O08811 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ercc2O08811 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ercc2O08811 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ercc2O08811 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.58■■□□□ 1.21
Ercc2O08811 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ercc2O08811 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.58■■□□□ 1.21
Ercc2O08811 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ercc2O08811 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ercc2O08811 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ercc2O08811 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ercc2O08811 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.57■■□□□ 1.2
Ercc2O08811 Gm12366-201ENSMUST00000121722 873 ntBASIC22.57■■□□□ 1.2
Ercc2O08811 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.57■■□□□ 1.2
Ercc2O08811 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Ercc2O08811 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.57■■□□□ 1.2
Ercc2O08811 Gm5786-201ENSMUST00000085368 882 ntBASIC22.57■■□□□ 1.2
Ercc2O08811 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ercc2O08811 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ercc2O08811 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ercc2O08811 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ercc2O08811 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ercc2O08811 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ercc2O08811 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ercc2O08811 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.55■■□□□ 1.2
Ercc2O08811 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc2O08811 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Ercc2O08811 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ercc2O08811 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ercc2O08811 Gm7332-201ENSMUST00000118351 454 ntBASIC22.54■■□□□ 1.2
Ercc2O08811 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ercc2O08811 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.54■■□□□ 1.2
Ercc2O08811 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ercc2O08811 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Ercc2O08811 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ercc2O08811 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ercc2O08811 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.53■■□□□ 1.2
Ercc2O08811 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.53■■□□□ 1.2
Ercc2O08811 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ercc2O08811 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ercc2O08811 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ercc2O08811 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ercc2O08811 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
Ercc2O08811 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ercc2O08811 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ercc2O08811 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ercc2O08811 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Ercc2O08811 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ercc2O08811 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ercc2O08811 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ercc2O08811 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms