Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11397F6V5V4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm11397F6V5V4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11397F6V5V4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm11397F6V5V4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm11397F6V5V4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11397F6V5V4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11397F6V5V4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11397F6V5V4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11397F6V5V4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11397F6V5V4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11397F6V5V4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11397F6V5V4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm11397F6V5V4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Gm11397F6V5V4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Gm11397F6V5V4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm11397F6V5V4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Gm11397F6V5V4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Gm11397F6V5V4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.32■□□□□ 0.84
Gm11397F6V5V4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm11397F6V5V4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Gm11397F6V5V4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm11397F6V5V4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11397F6V5V4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm11397F6V5V4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11397F6V5V4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm11397F6V5V4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Gm11397F6V5V4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Gm11397F6V5V4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.28■□□□□ 0.84
Gm11397F6V5V4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm11397F6V5V4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Gm11397F6V5V4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm11397F6V5V4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm11397F6V5V4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Gm6311-201ENSMUST00000073790 878 ntBASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm11397F6V5V4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11397F6V5V4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11397F6V5V4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm11397F6V5V4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11397F6V5V4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11397F6V5V4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11397F6V5V4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11397F6V5V4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11397F6V5V4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11397F6V5V4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11397F6V5V4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11397F6V5V4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11397F6V5V4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm11397F6V5V4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11397F6V5V4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11397F6V5V4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11397F6V5V4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm11397F6V5V4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11397F6V5V4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms