Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Zc3h13E9Q784 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Zc3h13E9Q784 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC31.65■■■□□ 2.66
Zc3h13E9Q784 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Zc3h13E9Q784 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Zc3h13E9Q784 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Zc3h13E9Q784 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Zc3h13E9Q784 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Zc3h13E9Q784 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC31.63■■■□□ 2.65
Zc3h13E9Q784 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.63■■■□□ 2.65
Zc3h13E9Q784 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Zc3h13E9Q784 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Zc3h13E9Q784 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC31.62■■■□□ 2.65
Zc3h13E9Q784 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.62■■■□□ 2.65
Zc3h13E9Q784 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC31.62■■■□□ 2.65
Zc3h13E9Q784 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Zc3h13E9Q784 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Zc3h13E9Q784 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Zc3h13E9Q784 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Zc3h13E9Q784 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Zc3h13E9Q784 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.57■■■□□ 2.64
Zc3h13E9Q784 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Zc3h13E9Q784 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Zc3h13E9Q784 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Zc3h13E9Q784 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Zc3h13E9Q784 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Zc3h13E9Q784 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Zc3h13E9Q784 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Zc3h13E9Q784 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Zc3h13E9Q784 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Zc3h13E9Q784 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Zc3h13E9Q784 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Zc3h13E9Q784 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Zc3h13E9Q784 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Zc3h13E9Q784 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Zc3h13E9Q784 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.51■■■□□ 2.63
Zc3h13E9Q784 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Zc3h13E9Q784 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
Zc3h13E9Q784 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Zc3h13E9Q784 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Zc3h13E9Q784 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Zc3h13E9Q784 Gm7199-201ENSMUST00000118327 1485 ntBASIC31.48■■■□□ 2.63
Zc3h13E9Q784 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Zc3h13E9Q784 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Zc3h13E9Q784 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Zc3h13E9Q784 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.46■■■□□ 2.63
Zc3h13E9Q784 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Zc3h13E9Q784 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Zc3h13E9Q784 Gm9847-201ENSMUST00000052528 599 ntBASIC31.45■■■□□ 2.63
Zc3h13E9Q784 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Zc3h13E9Q784 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Zc3h13E9Q784 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.45■■■□□ 2.62
Zc3h13E9Q784 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Zc3h13E9Q784 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Zc3h13E9Q784 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Zc3h13E9Q784 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
Zc3h13E9Q784 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Zc3h13E9Q784 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC31.43■■■□□ 2.62
Zc3h13E9Q784 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Zc3h13E9Q784 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC31.41■■■□□ 2.62
Zc3h13E9Q784 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Zc3h13E9Q784 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Zc3h13E9Q784 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Zc3h13E9Q784 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Zc3h13E9Q784 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Zc3h13E9Q784 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Zc3h13E9Q784 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Zc3h13E9Q784 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Zc3h13E9Q784 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Zc3h13E9Q784 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Zc3h13E9Q784 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Zc3h13E9Q784 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Zc3h13E9Q784 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Zc3h13E9Q784 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC31.37■■■□□ 2.61
Zc3h13E9Q784 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC31.36■■■□□ 2.61
Zc3h13E9Q784 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC31.35■■■□□ 2.61
Zc3h13E9Q784 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.35■■■□□ 2.61
Zc3h13E9Q784 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Zc3h13E9Q784 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Zc3h13E9Q784 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Zc3h13E9Q784 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Zc3h13E9Q784 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC31.32■■■□□ 2.61
Zc3h13E9Q784 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Zc3h13E9Q784 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms