Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Chd2E9PZM4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Chd2E9PZM4 Serp2-204ENSMUST00000228055 705 ntBASIC31.79■■■□□ 2.68
Chd2E9PZM4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Chd2E9PZM4 Gm13241-201ENSMUST00000094493 780 ntBASIC31.79■■■□□ 2.68
Chd2E9PZM4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Chd2E9PZM4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.78■■■□□ 2.68
Chd2E9PZM4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd2E9PZM4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Chd2E9PZM4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Chd2E9PZM4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Chd2E9PZM4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Chd2E9PZM4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Chd2E9PZM4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC31.76■■■□□ 2.67
Chd2E9PZM4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Chd2E9PZM4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Chd2E9PZM4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Chd2E9PZM4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Chd2E9PZM4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Chd2E9PZM4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Chd2E9PZM4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC31.72■■■□□ 2.67
Chd2E9PZM4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.72■■■□□ 2.67
Chd2E9PZM4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Chd2E9PZM4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC31.72■■■□□ 2.67
Chd2E9PZM4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Chd2E9PZM4 Gm16464-201ENSMUST00000117815 1095 ntBASIC31.7■■■□□ 2.67
Chd2E9PZM4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Chd2E9PZM4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Chd2E9PZM4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Chd2E9PZM4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.69■■■□□ 2.66
Chd2E9PZM4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC31.68■■■□□ 2.66
Chd2E9PZM4 Gm7199-201ENSMUST00000118327 1485 ntBASIC31.68■■■□□ 2.66
Chd2E9PZM4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Chd2E9PZM4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC31.68■■■□□ 2.66
Chd2E9PZM4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.68■■■□□ 2.66
Chd2E9PZM4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC31.66■■■□□ 2.66
Chd2E9PZM4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Chd2E9PZM4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Chd2E9PZM4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.64■■■□□ 2.66
Chd2E9PZM4 Gm22238-201ENSMUST00000175222 88 ntBASIC31.64■■■□□ 2.66
Chd2E9PZM4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC31.63■■■□□ 2.65
Chd2E9PZM4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Chd2E9PZM4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Chd2E9PZM4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.63■■■□□ 2.65
Chd2E9PZM4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Chd2E9PZM4 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.63■■■□□ 2.65
Chd2E9PZM4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Chd2E9PZM4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Chd2E9PZM4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Chd2E9PZM4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Chd2E9PZM4 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.62■■■□□ 2.65
Chd2E9PZM4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.61■■■□□ 2.65
Chd2E9PZM4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Chd2E9PZM4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Chd2E9PZM4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Chd2E9PZM4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC31.59■■■□□ 2.65
Chd2E9PZM4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Chd2E9PZM4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Chd2E9PZM4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Chd2E9PZM4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Chd2E9PZM4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Chd2E9PZM4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Chd2E9PZM4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Chd2E9PZM4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Chd2E9PZM4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Chd2E9PZM4 Gm7417-201ENSMUST00000192950 473 ntBASIC31.57■■■□□ 2.64
Chd2E9PZM4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
Chd2E9PZM4 Gm9847-201ENSMUST00000052528 599 ntBASIC31.56■■■□□ 2.64
Chd2E9PZM4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC31.56■■■□□ 2.64
Chd2E9PZM4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.56■■■□□ 2.64
Chd2E9PZM4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
Chd2E9PZM4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC31.54■■■□□ 2.64
Chd2E9PZM4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Chd2E9PZM4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Chd2E9PZM4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
Chd2E9PZM4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.53■■■□□ 2.64
Chd2E9PZM4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Chd2E9PZM4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Chd2E9PZM4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Chd2E9PZM4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
Chd2E9PZM4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC31.5■■■□□ 2.63
Chd2E9PZM4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Chd2E9PZM4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC31.49■■■□□ 2.63
Chd2E9PZM4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Chd2E9PZM4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Chd2E9PZM4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Chd2E9PZM4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Chd2E9PZM4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC31.49■■■□□ 2.63
Chd2E9PZM4 Gm12922-201ENSMUST00000120626 809 ntBASIC31.48■■■□□ 2.63
Chd2E9PZM4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Chd2E9PZM4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Chd2E9PZM4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd2E9PZM4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC31.47■■■□□ 2.63
Chd2E9PZM4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms