Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sptbn4E9PX29 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.66■□□□□ 0.9
Sptbn4E9PX29 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.66■□□□□ 0.9
Sptbn4E9PX29 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Sptbn4E9PX29 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sptbn4E9PX29 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.65■□□□□ 0.9
Sptbn4E9PX29 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sptbn4E9PX29 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sptbn4E9PX29 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.65■□□□□ 0.9
Sptbn4E9PX29 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.65■□□□□ 0.9
Sptbn4E9PX29 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.64■□□□□ 0.9
Sptbn4E9PX29 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptbn4E9PX29 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sptbn4E9PX29 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.64■□□□□ 0.89
Sptbn4E9PX29 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Sptbn4E9PX29 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptbn4E9PX29 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptbn4E9PX29 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptbn4E9PX29 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.63■□□□□ 0.89
Sptbn4E9PX29 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptbn4E9PX29 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptbn4E9PX29 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.63■□□□□ 0.89
Sptbn4E9PX29 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.62■□□□□ 0.89
Sptbn4E9PX29 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptbn4E9PX29 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sptbn4E9PX29 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sptbn4E9PX29 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptbn4E9PX29 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptbn4E9PX29 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptbn4E9PX29 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptbn4E9PX29 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.61■□□□□ 0.89
Sptbn4E9PX29 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.61■□□□□ 0.89
Sptbn4E9PX29 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptbn4E9PX29 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptbn4E9PX29 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.6■□□□□ 0.89
Sptbn4E9PX29 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Sptbn4E9PX29 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Sptbn4E9PX29 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptbn4E9PX29 Golgb1-201ENSMUST00000023534 498 ntBASIC20.59■□□□□ 0.89
Sptbn4E9PX29 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sptbn4E9PX29 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sptbn4E9PX29 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptbn4E9PX29 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.58■□□□□ 0.89
Sptbn4E9PX29 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sptbn4E9PX29 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.58■□□□□ 0.88
Sptbn4E9PX29 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptbn4E9PX29 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.56■□□□□ 0.88
Sptbn4E9PX29 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sptbn4E9PX29 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sptbn4E9PX29 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sptbn4E9PX29 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sptbn4E9PX29 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptbn4E9PX29 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptbn4E9PX29 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptbn4E9PX29 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.55■□□□□ 0.88
Sptbn4E9PX29 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.55■□□□□ 0.88
Sptbn4E9PX29 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.55■□□□□ 0.88
Sptbn4E9PX29 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptbn4E9PX29 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptbn4E9PX29 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptbn4E9PX29 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sptbn4E9PX29 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptbn4E9PX29 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptbn4E9PX29 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptbn4E9PX29 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Sptbn4E9PX29 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sptbn4E9PX29 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sptbn4E9PX29 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sptbn4E9PX29 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptbn4E9PX29 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.5■□□□□ 0.87
Sptbn4E9PX29 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptbn4E9PX29 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sptbn4E9PX29 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sptbn4E9PX29 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sptbn4E9PX29 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.5■□□□□ 0.87
Sptbn4E9PX29 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.49■□□□□ 0.87
Sptbn4E9PX29 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms