Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hist1h2acC0HKE2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Hist1h2acC0HKE2 Terc-201ENSMUST00000082862 423 ntBASIC20.12■□□□□ 0.81
Hist1h2acC0HKE2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.12■□□□□ 0.81
Hist1h2acC0HKE2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h2acC0HKE2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h2acC0HKE2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h2acC0HKE2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h2acC0HKE2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h2acC0HKE2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.1■□□□□ 0.81
Hist1h2acC0HKE2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h2acC0HKE2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h2acC0HKE2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h2acC0HKE2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h2acC0HKE2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h2acC0HKE2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.08■□□□□ 0.81
Hist1h2acC0HKE2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hist1h2acC0HKE2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hist1h2acC0HKE2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hist1h2acC0HKE2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hist1h2acC0HKE2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h2acC0HKE2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h2acC0HKE2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.07■□□□□ 0.8
Hist1h2acC0HKE2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.07■□□□□ 0.8
Hist1h2acC0HKE2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h2acC0HKE2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h2acC0HKE2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hist1h2acC0HKE2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h2acC0HKE2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h2acC0HKE2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h2acC0HKE2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h2acC0HKE2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hist1h2acC0HKE2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.03■□□□□ 0.8
Hist1h2acC0HKE2 Gm6311-201ENSMUST00000073790 878 ntBASIC20.03■□□□□ 0.8
Hist1h2acC0HKE2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h2acC0HKE2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h2acC0HKE2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h2acC0HKE2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hist1h2acC0HKE2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hist1h2acC0HKE2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h2acC0HKE2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h2acC0HKE2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h2acC0HKE2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.01■□□□□ 0.79
Hist1h2acC0HKE2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Hist1h2acC0HKE2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h2acC0HKE2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h2acC0HKE2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h2acC0HKE2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20■□□□□ 0.79
Hist1h2acC0HKE2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h2acC0HKE2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h2acC0HKE2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h2acC0HKE2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.98■□□□□ 0.79
Hist1h2acC0HKE2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Hist1h2acC0HKE2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h2acC0HKE2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h2acC0HKE2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h2acC0HKE2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms