Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC48.4■■■■■ 5.34
Gm35339A0A140LHH9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC48.4■■■■■ 5.34
Gm35339A0A140LHH9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC48.4■■■■■ 5.34
Gm35339A0A140LHH9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC48.4■■■■■ 5.34
Gm35339A0A140LHH9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC48.39■■■■■ 5.34
Gm35339A0A140LHH9 Gm13241-201ENSMUST00000094493 780 ntBASIC48.39■■■■■ 5.34
Gm35339A0A140LHH9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC48.38■■■■■ 5.34
Gm35339A0A140LHH9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC48.37■■■■■ 5.33
Gm35339A0A140LHH9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC48.36■■■■■ 5.33
Gm35339A0A140LHH9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC48.36■■■■■ 5.33
Gm35339A0A140LHH9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC48.36■■■■■ 5.33
Gm35339A0A140LHH9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC48.36■■■■■ 5.33
Gm35339A0A140LHH9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC48.36■■■■■ 5.33
Gm35339A0A140LHH9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC48.35■■■■■ 5.33
Gm35339A0A140LHH9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC48.34■■■■■ 5.33
Gm35339A0A140LHH9 Gm16464-201ENSMUST00000117815 1095 ntBASIC48.34■■■■■ 5.33
Gm35339A0A140LHH9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC48.34■■■■■ 5.33
Gm35339A0A140LHH9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC48.33■■■■■ 5.33
Gm35339A0A140LHH9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC48.33■■■■■ 5.33
Gm35339A0A140LHH9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC48.32■■■■■ 5.33
Gm35339A0A140LHH9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC48.31■■■■■ 5.32
Gm35339A0A140LHH9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC48.31■■■■■ 5.32
Gm35339A0A140LHH9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC48.3■■■■■ 5.32
Gm35339A0A140LHH9 Gm7199-201ENSMUST00000118327 1485 ntBASIC48.3■■■■■ 5.32
Gm35339A0A140LHH9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC48.29■■■■■ 5.32
Gm35339A0A140LHH9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC48.29■■■■■ 5.32
Gm35339A0A140LHH9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC48.29■■■■■ 5.32
Gm35339A0A140LHH9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC48.29■■■■■ 5.32
Gm35339A0A140LHH9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC48.28■■■■■ 5.32
Gm35339A0A140LHH9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC48.27■■■■■ 5.32
Gm35339A0A140LHH9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC48.26■■■■■ 5.32
Gm35339A0A140LHH9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC48.25■■■■■ 5.32
Gm35339A0A140LHH9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC48.25■■■■■ 5.32
Gm35339A0A140LHH9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC48.25■■■■■ 5.31
Gm35339A0A140LHH9 Serp2-204ENSMUST00000228055 705 ntBASIC48.23■■■■■ 5.31
Gm35339A0A140LHH9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC48.23■■■■■ 5.31
Gm35339A0A140LHH9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC48.22■■■■■ 5.31
Gm35339A0A140LHH9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC48.21■■■■■ 5.31
Gm35339A0A140LHH9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC48.21■■■■■ 5.31
Gm35339A0A140LHH9 Gm22238-201ENSMUST00000175222 88 ntBASIC48.21■■■■■ 5.31
Gm35339A0A140LHH9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC48.2■■■■■ 5.31
Gm35339A0A140LHH9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC48.2■■■■■ 5.31
Gm35339A0A140LHH9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC48.18■■■■■ 5.3
Gm35339A0A140LHH9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC48.17■■■■■ 5.3
Gm35339A0A140LHH9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC48.16■■■■■ 5.3
Gm35339A0A140LHH9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC48.15■■■■■ 5.3
Gm35339A0A140LHH9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC48.15■■■■■ 5.3
Gm35339A0A140LHH9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC48.15■■■■■ 5.3
Gm35339A0A140LHH9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC48.15■■■■■ 5.3
Gm35339A0A140LHH9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC48.14■■■■■ 5.3
Gm35339A0A140LHH9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC48.13■■■■■ 5.3
Gm35339A0A140LHH9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC48.13■■■■■ 5.29
Gm35339A0A140LHH9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC48.12■■■■■ 5.29
Gm35339A0A140LHH9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC48.1■■■■■ 5.29
Gm35339A0A140LHH9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC48.1■■■■■ 5.29
Gm35339A0A140LHH9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC48.1■■■■■ 5.29
Gm35339A0A140LHH9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC48.09■■■■■ 5.29
Gm35339A0A140LHH9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC48.09■■■■■ 5.29
Gm35339A0A140LHH9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC48.09■■■■■ 5.29
Gm35339A0A140LHH9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC48.09■■■■■ 5.29
Gm35339A0A140LHH9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC48.09■■■■■ 5.29
Gm35339A0A140LHH9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC48.09■■■■■ 5.29
Gm35339A0A140LHH9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC48.08■■■■■ 5.29
Gm35339A0A140LHH9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC48.08■■■■■ 5.29
Gm35339A0A140LHH9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC48.07■■■■■ 5.29
Gm35339A0A140LHH9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC48.07■■■■■ 5.29
Gm35339A0A140LHH9 Gm6206-201ENSMUST00000133472 2199 ntBASIC48.06■■■■■ 5.28
Gm35339A0A140LHH9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC48.05■■■■■ 5.28
Gm35339A0A140LHH9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC48.05■■■■■ 5.28
Gm35339A0A140LHH9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC48.04■■■■■ 5.28
Gm35339A0A140LHH9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC48.04■■■■■ 5.28
Gm35339A0A140LHH9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC48.03■■■■■ 5.28
Gm35339A0A140LHH9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC48.03■■■■■ 5.28
Gm35339A0A140LHH9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC48.03■■■■■ 5.28
Gm35339A0A140LHH9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC48.02■■■■■ 5.28
Gm35339A0A140LHH9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC48.02■■■■■ 5.28
Gm35339A0A140LHH9 Gm43034-201ENSMUST00000198678 1364 ntBASIC48.02■■■■■ 5.28
Gm35339A0A140LHH9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC48.02■■■■■ 5.28
Gm35339A0A140LHH9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC48.01■■■■■ 5.28
Gm35339A0A140LHH9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC48.01■■■■■ 5.28
Gm35339A0A140LHH9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC48.01■■■■■ 5.28
Gm35339A0A140LHH9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC48.01■■■■■ 5.28
Gm35339A0A140LHH9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC47.99■■■■■ 5.27
Gm35339A0A140LHH9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC47.99■■■■■ 5.27
Gm35339A0A140LHH9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC47.99■■■■■ 5.27
Gm35339A0A140LHH9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC47.98■■■■■ 5.27
Gm35339A0A140LHH9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC47.97■■■■■ 5.27
Gm35339A0A140LHH9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Gm12922-201ENSMUST00000120626 809 ntBASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Gm7417-201ENSMUST00000192950 473 ntBASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Nsd1-206ENSMUST00000224918 1001 ntBASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Gm9847-201ENSMUST00000052528 599 ntBASIC47.96■■■■■ 5.27
Gm35339A0A140LHH9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC47.93■■■■■ 5.26
Gm35339A0A140LHH9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC47.93■■■■■ 5.26
Gm35339A0A140LHH9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC47.92■■■■■ 5.26
Gm35339A0A140LHH9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC47.91■■■■■ 5.26
Gm35339A0A140LHH9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC47.9■■■■■ 5.26
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms