Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav4-3A0A0B4J1K1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-3A0A0B4J1K1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-3A0A0B4J1K1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav4-3A0A0B4J1K1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-3A0A0B4J1K1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-3A0A0B4J1K1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-3A0A0B4J1K1 Gm16148-201ENSMUST00000119653 893 ntBASIC15.13■□□□□ 0.01
Trav4-3A0A0B4J1K1 Gm30023-201ENSMUST00000197970 889 ntBASIC15.13■□□□□ 0.01
Trav4-3A0A0B4J1K1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav4-3A0A0B4J1K1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-3A0A0B4J1K1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-3A0A0B4J1K1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-3A0A0B4J1K1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-3A0A0B4J1K1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-3A0A0B4J1K1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-3A0A0B4J1K1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Trav4-3A0A0B4J1K1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-3A0A0B4J1K1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-3A0A0B4J1K1 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.1■□□□□ 0.01
Trav4-3A0A0B4J1K1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-3A0A0B4J1K1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-3A0A0B4J1K1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-3A0A0B4J1K1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-3A0A0B4J1K1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav4-3A0A0B4J1K1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav4-3A0A0B4J1K1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4-3A0A0B4J1K1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav4-3A0A0B4J1K1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4-3A0A0B4J1K1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav4-3A0A0B4J1K1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.05■□□□□ 0
Trav4-3A0A0B4J1K1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-3A0A0B4J1K1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-3A0A0B4J1K1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav4-3A0A0B4J1K1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4-3A0A0B4J1K1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav4-3A0A0B4J1K1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Notumos-201ENSMUST00000151998 2659 ntBASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4-3A0A0B4J1K1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-3A0A0B4J1K1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4-3A0A0B4J1K1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4-3A0A0B4J1K1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-3A0A0B4J1K1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-3A0A0B4J1K1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-3A0A0B4J1K1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-3A0A0B4J1K1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15□□□□□ -0.01
Trav4-3A0A0B4J1K1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav4-3A0A0B4J1K1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 553.4 ms