Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6n-6A0A075B6B2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6n-6A0A075B6B2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Gm7432-201ENSMUST00000210343 879 ntBASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-6A0A075B6B2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Particl-201ENSMUST00000205370 1560 ntBASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-6A0A075B6B2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-6A0A075B6B2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav6n-6A0A075B6B2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-6A0A075B6B2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-6A0A075B6B2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-6A0A075B6B2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-6A0A075B6B2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-6A0A075B6B2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.29■□□□□ 0.2
Trav6n-6A0A075B6B2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.29■□□□□ 0.2
Trav6n-6A0A075B6B2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6n-6A0A075B6B2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6n-6A0A075B6B2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav6n-6A0A075B6B2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-6A0A075B6B2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-6A0A075B6B2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-6A0A075B6B2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav6n-6A0A075B6B2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6n-6A0A075B6B2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav6n-6A0A075B6B2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-6A0A075B6B2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6n-6A0A075B6B2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav6n-6A0A075B6B2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
Trav6n-6A0A075B6B2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav6n-6A0A075B6B2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Trav6n-6A0A075B6B2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6n-6A0A075B6B2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6n-6A0A075B6B2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 205.3 ms