Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav14n-3A0A075B645 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav14n-3A0A075B645 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav14n-3A0A075B645 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Trav14n-3A0A075B645 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav14n-3A0A075B645 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav14n-3A0A075B645 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav14n-3A0A075B645 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav14n-3A0A075B645 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Trav14n-3A0A075B645 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav14n-3A0A075B645 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav14n-3A0A075B645 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14n-3A0A075B645 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14n-3A0A075B645 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14n-3A0A075B645 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14n-3A0A075B645 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14n-3A0A075B645 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14n-3A0A075B645 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav14n-3A0A075B645 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.68■□□□□ 0.26
Trav14n-3A0A075B645 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.68■□□□□ 0.26
Trav14n-3A0A075B645 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav14n-3A0A075B645 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14n-3A0A075B645 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14n-3A0A075B645 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav14n-3A0A075B645 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav14n-3A0A075B645 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav14n-3A0A075B645 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14n-3A0A075B645 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav14n-3A0A075B645 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav14n-3A0A075B645 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav14n-3A0A075B645 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav14n-3A0A075B645 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14n-3A0A075B645 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav14n-3A0A075B645 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav14n-3A0A075B645 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav14n-3A0A075B645 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav14n-3A0A075B645 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav14n-3A0A075B645 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav14n-3A0A075B645 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav14n-3A0A075B645 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav14n-3A0A075B645 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav14n-3A0A075B645 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav14n-3A0A075B645 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav14n-3A0A075B645 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.62■□□□□ 0.25
Trav14n-3A0A075B645 Notumos-201ENSMUST00000151998 2659 ntBASIC16.61■□□□□ 0.25
Trav14n-3A0A075B645 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav14n-3A0A075B645 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav14n-3A0A075B645 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav14n-3A0A075B645 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav14n-3A0A075B645 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav14n-3A0A075B645 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav14n-3A0A075B645 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trav14n-3A0A075B645 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav14n-3A0A075B645 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav14n-3A0A075B645 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav14n-3A0A075B645 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav14n-3A0A075B645 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav14n-3A0A075B645 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.57■□□□□ 0.24
Trav14n-3A0A075B645 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms