Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8-1A0A075B641 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8-1A0A075B641 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav8-1A0A075B641 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8-1A0A075B641 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8-1A0A075B641 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8-1A0A075B641 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8-1A0A075B641 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8-1A0A075B641 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8-1A0A075B641 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8-1A0A075B641 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8-1A0A075B641 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8-1A0A075B641 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8-1A0A075B641 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8-1A0A075B641 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8-1A0A075B641 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8-1A0A075B641 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav8-1A0A075B641 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav8-1A0A075B641 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8-1A0A075B641 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav8-1A0A075B641 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8-1A0A075B641 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8-1A0A075B641 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8-1A0A075B641 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8-1A0A075B641 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav8-1A0A075B641 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8-1A0A075B641 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav8-1A0A075B641 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav8-1A0A075B641 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav8-1A0A075B641 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8-1A0A075B641 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8-1A0A075B641 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8-1A0A075B641 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8-1A0A075B641 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav8-1A0A075B641 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav8-1A0A075B641 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8-1A0A075B641 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Particl-201ENSMUST00000205370 1560 ntBASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8-1A0A075B641 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav8-1A0A075B641 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8-1A0A075B641 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8-1A0A075B641 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8-1A0A075B641 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8-1A0A075B641 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8-1A0A075B641 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8-1A0A075B641 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8-1A0A075B641 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8-1A0A075B641 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms