Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav4d-3A0A075B625 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4d-3A0A075B625 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav4d-3A0A075B625 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4d-3A0A075B625 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4d-3A0A075B625 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4d-3A0A075B625 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4d-3A0A075B625 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4d-3A0A075B625 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4d-3A0A075B625 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4d-3A0A075B625 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4d-3A0A075B625 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4d-3A0A075B625 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4d-3A0A075B625 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav4d-3A0A075B625 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4d-3A0A075B625 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4d-3A0A075B625 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav4d-3A0A075B625 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav4d-3A0A075B625 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4d-3A0A075B625 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav4d-3A0A075B625 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav4d-3A0A075B625 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.02■□□□□ -0
Trav4d-3A0A075B625 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4d-3A0A075B625 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav4d-3A0A075B625 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav4d-3A0A075B625 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4d-3A0A075B625 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.02□□□□□ -0.01
Trav4d-3A0A075B625 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.02□□□□□ -0.01
Trav4d-3A0A075B625 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4d-3A0A075B625 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4d-3A0A075B625 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4d-3A0A075B625 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4d-3A0A075B625 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4d-3A0A075B625 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.01□□□□□ -0.01
Trav4d-3A0A075B625 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4d-3A0A075B625 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4d-3A0A075B625 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4d-3A0A075B625 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4d-3A0A075B625 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.98□□□□□ -0.01
Trav4d-3A0A075B625 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4d-3A0A075B625 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4d-3A0A075B625 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4d-3A0A075B625 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4d-3A0A075B625 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4d-3A0A075B625 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav4d-3A0A075B625 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4d-3A0A075B625 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms