Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav7n-4A0A075B620 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav7n-4A0A075B620 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav7n-4A0A075B620 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav7n-4A0A075B620 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav7n-4A0A075B620 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav7n-4A0A075B620 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 Notumos-201ENSMUST00000151998 2659 ntBASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav7n-4A0A075B620 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trav7n-4A0A075B620 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.77■□□□□ 0.28
Trav7n-4A0A075B620 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav7n-4A0A075B620 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav7n-4A0A075B620 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav7n-4A0A075B620 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav7n-4A0A075B620 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav7n-4A0A075B620 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav7n-4A0A075B620 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav7n-4A0A075B620 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7n-4A0A075B620 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trav7n-4A0A075B620 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav7n-4A0A075B620 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.74■□□□□ 0.27
Trav7n-4A0A075B620 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7n-4A0A075B620 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav7n-4A0A075B620 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7n-4A0A075B620 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7n-4A0A075B620 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7n-4A0A075B620 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7n-4A0A075B620 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav7n-4A0A075B620 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7n-4A0A075B620 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7n-4A0A075B620 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7n-4A0A075B620 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav7n-4A0A075B620 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7n-4A0A075B620 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav7n-4A0A075B620 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7n-4A0A075B620 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trav7n-4A0A075B620 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7n-4A0A075B620 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7n-4A0A075B620 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7n-4A0A075B620 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7n-4A0A075B620 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7n-4A0A075B620 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7n-4A0A075B620 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7n-4A0A075B620 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7n-4A0A075B620 Gm24804-201ENSMUST00000174982 85 ntBASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms