Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Gm45098-201ENSMUST00000207179 657 ntBASIC14.57□□□□□ -0.08
H2afb2S4R1M3 AW822252-206ENSMUST00000208904 237 ntBASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
H2afb2S4R1M3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm15483-201ENSMUST00000120338 456 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afb2S4R1M3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Gm14494-201ENSMUST00000118786 435 ntBASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb2S4R1M3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms