Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Gm17968-201ENSMUST00000194902 784 ntBASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tubb3Q9ERD7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubb3Q9ERD7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Gm5177-201ENSMUST00000183092 997 ntBASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tubb3Q9ERD7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubb3Q9ERD7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms