Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.66□□□□□ -0.22
Rtp4Q9ER80 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rtp4Q9ER80 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 AA543401-201ENSMUST00000164248 1269 ntBASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Gm25948-201ENSMUST00000175334 112 ntBASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Gm18057-201ENSMUST00000208220 503 ntBASIC13.65□□□□□ -0.22
Rtp4Q9ER80 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.65□□□□□ -0.22
Rtp4Q9ER80 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtp4Q9ER80 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.64□□□□□ -0.23
Rtp4Q9ER80 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.64□□□□□ -0.23
Rtp4Q9ER80 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms