Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.16■□□□□ 0.34
Col20a1Q923P0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Gm4875-201ENSMUST00000118257 786 ntBASIC17.16■□□□□ 0.34
Col20a1Q923P0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Gm2423-201ENSMUST00000074863 733 ntBASIC17.16■□□□□ 0.34
Col20a1Q923P0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col20a1Q923P0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.15■□□□□ 0.34
Col20a1Q923P0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Gm16215-201ENSMUST00000161990 637 ntBASIC17.15■□□□□ 0.34
Col20a1Q923P0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col20a1Q923P0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col20a1Q923P0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col20a1Q923P0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col20a1Q923P0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col20a1Q923P0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col20a1Q923P0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.14■□□□□ 0.33
Col20a1Q923P0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.14■□□□□ 0.33
Col20a1Q923P0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Gm15321-201ENSMUST00000121290 288 ntBASIC17.14■□□□□ 0.33
Col20a1Q923P0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.14■□□□□ 0.33
Col20a1Q923P0 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.14■□□□□ 0.33
Col20a1Q923P0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col20a1Q923P0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms