Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmc1Q8R4P5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.84■□□□□ 0.45
Tmc1Q8R4P5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmc1Q8R4P5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmc1Q8R4P5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmc1Q8R4P5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmc1Q8R4P5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmc1Q8R4P5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tmc1Q8R4P5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmc1Q8R4P5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Gm25925-201ENSMUST00000158314 306 ntBASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tmc1Q8R4P5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Gm27628-201ENSMUST00000184911 107 ntBASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmc1Q8R4P5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Gm14140-201ENSMUST00000119999 995 ntBASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmc1Q8R4P5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms