Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Zcchc9Q8R1J3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Gm29541-201ENSMUST00000191351 678 ntBASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Zcchc9Q8R1J3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Zcchc9Q8R1J3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Zcchc9Q8R1J3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Zcchc9Q8R1J3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Zcchc9Q8R1J3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Zcchc9Q8R1J3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Zcchc9Q8R1J3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms