Protein–RNA interactions for Protein: Q8C5U9

Ubqln3, Ubiquilin-3, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3Q8C5U9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubqln3Q8C5U9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ubqln3Q8C5U9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ubqln3Q8C5U9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ubqln3Q8C5U9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Gm12008-201ENSMUST00000117791 755 ntBASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.8□□□□□ -0.36
Ubqln3Q8C5U9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms