Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Gm13464-201ENSMUST00000119418 935 ntBASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Rps4l-201ENSMUST00000071745 943 ntBASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdhr3Q8BL00 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms