Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.4□□□□□ -0.1
Trappc6aQ78XR0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc6aQ78XR0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc6aQ78XR0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc6aQ78XR0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trappc6aQ78XR0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trappc6aQ78XR0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11
Trappc6aQ78XR0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Gm9726-201ENSMUST00000180321 678 ntBASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trappc6aQ78XR0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Gm6912-201ENSMUST00000117218 544 ntBASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Gm37917-201ENSMUST00000194711 392 ntBASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Mir125a-201ENSMUST00000083545 68 ntBASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trappc6aQ78XR0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Gm8749-201ENSMUST00000117737 331 ntBASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trappc6aQ78XR0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms