Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scube3Q66PY1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC15.33■□□□□ 0.04
Scube3Q66PY1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.33■□□□□ 0.04
Scube3Q66PY1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scube3Q66PY1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Mir449b-201ENSMUST00000104833 80 ntBASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm24158-201ENSMUST00000175263 71 ntBASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm43377-201ENSMUST00000201640 455 ntBASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm9182-201ENSMUST00000217829 639 ntBASIC15.32■□□□□ 0.04
Scube3Q66PY1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scube3Q66PY1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
Scube3Q66PY1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Gm37230-201ENSMUST00000194491 818 ntBASIC15.31■□□□□ 0.04
Scube3Q66PY1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.31■□□□□ 0.04
Scube3Q66PY1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scube3Q66PY1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gm13015-201ENSMUST00000118674 204 ntBASIC15.3■□□□□ 0.04
Scube3Q66PY1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.3■□□□□ 0.04
Scube3Q66PY1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gm17872-201ENSMUST00000222550 532 ntBASIC15.3■□□□□ 0.04
Scube3Q66PY1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms