Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.38□□□□□ -0.59
Ctdsp1P58466 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.38□□□□□ -0.59
Ctdsp1P58466 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.38□□□□□ -0.59
Ctdsp1P58466 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.38□□□□□ -0.59
Ctdsp1P58466 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ctdsp1P58466 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.37□□□□□ -0.59
Ctdsp1P58466 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.37□□□□□ -0.59
Ctdsp1P58466 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.37□□□□□ -0.59
Ctdsp1P58466 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ctdsp1P58466 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.36□□□□□ -0.59
Ctdsp1P58466 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.36□□□□□ -0.59
Ctdsp1P58466 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms