Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
KRT20P35900 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT20P35900 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 AP001094.4-201ENST00000579008 2176 ntBASIC16.71■□□□□ 0.27
KRT20P35900 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 AC093010.1-201ENST00000473625 1624 ntBASIC16.71■□□□□ 0.27
KRT20P35900 AL023806.1-201ENST00000603994 1649 ntBASIC16.71■□□□□ 0.27
KRT20P35900 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT20P35900 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KRT20P35900 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KRT20P35900 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
KRT20P35900 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
KRT20P35900 IGHGP-201ENST00000390555 1178 ntBASIC16.71■□□□□ 0.27
KRT20P35900 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT20P35900 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT20P35900 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT20P35900 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 AL445228.2-201ENST00000605589 952 ntBASIC16.71■□□□□ 0.27
KRT20P35900 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT20P35900 LINC00602-201ENST00000629776 2065 ntBASIC16.71■□□□□ 0.27
KRT20P35900 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT20P35900 AC022898.2-201ENST00000616822 1312 ntBASIC16.7■□□□□ 0.26
KRT20P35900 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT20P35900 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT20P35900 TSPY12P-201ENST00000421279 868 ntBASIC16.7■□□□□ 0.26
KRT20P35900 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT20P35900 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT20P35900 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT20P35900 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT20P35900 AC005332.3-201ENST00000589904 676 ntBASIC16.7■□□□□ 0.26
KRT20P35900 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT20P35900 AC004263.2-201ENST00000617183 678 ntBASIC16.7■□□□□ 0.26
KRT20P35900 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT20P35900 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT20P35900 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.7■□□□□ 0.26
KRT20P35900 Z83836.1-201ENST00000624605 1642 ntBASIC16.7■□□□□ 0.26
KRT20P35900 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT20P35900 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KRT20P35900 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT20P35900 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
KRT20P35900 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 AL353692.3-201ENST00000407031 1396 ntBASIC16.69■□□□□ 0.26
KRT20P35900 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
KRT20P35900 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT20P35900 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT20P35900 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT20P35900 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT20P35900 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT20P35900 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT20P35900 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms