Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Foxa1P35582 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Foxa1P35582 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.48□□□□□ -0.25
Foxa1P35582 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.48□□□□□ -0.25
Foxa1P35582 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.48□□□□□ -0.25
Foxa1P35582 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Gm43575-201ENSMUST00000196420 516 ntBASIC13.48□□□□□ -0.25
Foxa1P35582 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.48□□□□□ -0.25
Foxa1P35582 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Gm9182-201ENSMUST00000217829 639 ntBASIC13.48□□□□□ -0.25
Foxa1P35582 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Foxa1P35582 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.48□□□□□ -0.25
Foxa1P35582 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Foxa1P35582 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxa1P35582 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.48□□□□□ -0.25
Foxa1P35582 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Foxa1P35582 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.47□□□□□ -0.25
Foxa1P35582 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Foxa1P35582 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Gm2810-201ENSMUST00000118681 990 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.47□□□□□ -0.25
Foxa1P35582 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.47□□□□□ -0.25
Foxa1P35582 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.47□□□□□ -0.25
Foxa1P35582 Gm18737-201ENSMUST00000173594 937 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Gm44335-201ENSMUST00000196879 141 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Gm44297-201ENSMUST00000198304 141 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Gm44346-201ENSMUST00000198851 141 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Chchd1-203ENSMUST00000224633 557 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.47□□□□□ -0.25
Foxa1P35582 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.47□□□□□ -0.25
Foxa1P35582 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Foxa1P35582 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Foxa1P35582 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Foxa1P35582 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.46□□□□□ -0.25
Foxa1P35582 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Foxa1P35582 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.46□□□□□ -0.25
Foxa1P35582 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.46□□□□□ -0.25
Foxa1P35582 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.46□□□□□ -0.25
Foxa1P35582 Mir6990-201ENSMUST00000183724 91 ntBASIC13.46□□□□□ -0.25
Foxa1P35582 Gm37230-201ENSMUST00000194491 818 ntBASIC13.46□□□□□ -0.25
Foxa1P35582 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.46□□□□□ -0.25
Foxa1P35582 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Foxa1P35582 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.46□□□□□ -0.25
Foxa1P35582 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Foxa1P35582 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms