Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
H2afxP27661 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
H2afxP27661 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.22■□□□□ 0.03
H2afxP27661 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Mir770-201ENSMUST00000103252 94 ntBASIC15.22■□□□□ 0.03
H2afxP27661 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.22■□□□□ 0.03
H2afxP27661 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Mir5130-201ENSMUST00000175160 84 ntBASIC15.22■□□□□ 0.03
H2afxP27661 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.22■□□□□ 0.03
H2afxP27661 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
H2afxP27661 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.22■□□□□ 0.03
H2afxP27661 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afxP27661 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
H2afxP27661 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.21■□□□□ 0.03
H2afxP27661 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afxP27661 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H2afxP27661 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H2afxP27661 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.21■□□□□ 0.03
H2afxP27661 Gm13436-201ENSMUST00000120418 567 ntBASIC15.21■□□□□ 0.03
H2afxP27661 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H2afxP27661 Gm27389-201ENSMUST00000183622 195 ntBASIC15.21■□□□□ 0.03
H2afxP27661 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.21■□□□□ 0.03
H2afxP27661 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.21■□□□□ 0.03
H2afxP27661 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2afxP27661 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
H2afxP27661 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afxP27661 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
H2afxP27661 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afxP27661 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afxP27661 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afxP27661 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.21■□□□□ 0.02
H2afxP27661 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
H2afxP27661 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
H2afxP27661 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.2■□□□□ 0.02
H2afxP27661 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
H2afxP27661 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
H2afxP27661 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
H2afxP27661 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.2■□□□□ 0.02
H2afxP27661 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.2■□□□□ 0.02
H2afxP27661 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.2■□□□□ 0.02
H2afxP27661 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afxP27661 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
H2afxP27661 Gm13312-201ENSMUST00000119631 718 ntBASIC15.2■□□□□ 0.02
H2afxP27661 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.2■□□□□ 0.02
H2afxP27661 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.2■□□□□ 0.02
H2afxP27661 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
H2afxP27661 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
H2afxP27661 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H2afxP27661 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afxP27661 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afxP27661 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
H2afxP27661 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afxP27661 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afxP27661 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afxP27661 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afxP27661 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms