Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.84□□□□□ -0.19
Rpl3P27659 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.84□□□□□ -0.19
Rpl3P27659 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rpl3P27659 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl3P27659 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Rpl3P27659 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl3P27659 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl3P27659 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl3P27659 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.83□□□□□ -0.19
Rpl3P27659 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl3P27659 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl3P27659 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.83□□□□□ -0.19
Rpl3P27659 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.83□□□□□ -0.2
Rpl3P27659 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.83□□□□□ -0.2
Rpl3P27659 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpl3P27659 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rpl3P27659 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rpl3P27659 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.83□□□□□ -0.2
Rpl3P27659 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpl3P27659 Gm18733-201ENSMUST00000173950 856 ntBASIC13.83□□□□□ -0.2
Rpl3P27659 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpl3P27659 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.83□□□□□ -0.2
Rpl3P27659 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl3P27659 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.82□□□□□ -0.2
Rpl3P27659 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Gm16198-201ENSMUST00000118766 670 ntBASIC13.82□□□□□ -0.2
Rpl3P27659 Gm14140-201ENSMUST00000119999 995 ntBASIC13.82□□□□□ -0.2
Rpl3P27659 Gm13597-201ENSMUST00000121239 375 ntBASIC13.82□□□□□ -0.2
Rpl3P27659 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rpl3P27659 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpl3P27659 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpl3P27659 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpl3P27659 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rpl3P27659 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpl3P27659 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpl3P27659 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl3P27659 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.81□□□□□ -0.2
Rpl3P27659 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpl3P27659 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl3P27659 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl3P27659 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpl3P27659 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms