Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col8a2P25318 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.17□□□□□ -0.46
Col8a2P25318 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.17□□□□□ -0.46
Col8a2P25318 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Gm17837-201ENSMUST00000186435 985 ntBASIC12.17□□□□□ -0.46
Col8a2P25318 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Gm45098-201ENSMUST00000207179 657 ntBASIC12.17□□□□□ -0.46
Col8a2P25318 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col8a2P25318 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.17□□□□□ -0.46
Col8a2P25318 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Col8a2P25318 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col8a2P25318 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col8a2P25318 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm8410-201ENSMUST00000117225 605 ntBASIC12.16□□□□□ -0.46
Col8a2P25318 Gm15920-201ENSMUST00000118998 402 ntBASIC12.16□□□□□ -0.46
Col8a2P25318 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm9824-201ENSMUST00000178707 561 ntBASIC12.16□□□□□ -0.46
Col8a2P25318 Gm28630-201ENSMUST00000187806 498 ntBASIC12.16□□□□□ -0.46
Col8a2P25318 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm6888-201ENSMUST00000221983 706 ntBASIC12.16□□□□□ -0.46
Col8a2P25318 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col8a2P25318 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col8a2P25318 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.16□□□□□ -0.46
Col8a2P25318 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col8a2P25318 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms