Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf1aP25118 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf1aP25118 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf1aP25118 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf1aP25118 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms