Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.31□□□□□ -0.6
Ccl1P10146 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Gm8344-201ENSMUST00000119813 856 ntBASIC11.31□□□□□ -0.6
Ccl1P10146 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccl1P10146 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccl1P10146 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccl1P10146 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.31□□□□□ -0.6
Ccl1P10146 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.31□□□□□ -0.6
Ccl1P10146 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccl1P10146 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccl1P10146 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccl1P10146 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Ccl1P10146 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl1P10146 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.3□□□□□ -0.6
Ccl1P10146 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Ccl1P10146 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Gm37055-201ENSMUST00000191866 133 ntBASIC11.3□□□□□ -0.6
Ccl1P10146 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.3□□□□□ -0.6
Ccl1P10146 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ccl1P10146 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl1P10146 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl1P10146 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.3□□□□□ -0.6
Ccl1P10146 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccl1P10146 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms