Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PrnpP04925 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PrnpP04925 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.04■□□□□ -0
PrnpP04925 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.04■□□□□ -0
PrnpP04925 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.04■□□□□ -0
PrnpP04925 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.04■□□□□ -0
PrnpP04925 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.04■□□□□ -0
PrnpP04925 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Gm25857-201ENSMUST00000082788 129 ntBASIC15.04■□□□□ -0
PrnpP04925 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PrnpP04925 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.03■□□□□ -0
PrnpP04925 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.03■□□□□ -0
PrnpP04925 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.03■□□□□ -0
PrnpP04925 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Gm8602-201ENSMUST00000184045 607 ntBASIC15.03■□□□□ -0
PrnpP04925 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.03■□□□□ -0
PrnpP04925 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.03■□□□□ -0
PrnpP04925 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.03■□□□□ -0
PrnpP04925 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.03■□□□□ -0
PrnpP04925 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.03■□□□□ -0
PrnpP04925 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.03■□□□□ -0
PrnpP04925 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.03■□□□□ -0
PrnpP04925 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PrnpP04925 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PrnpP04925 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.02■□□□□ -0
PrnpP04925 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.02■□□□□ -0
PrnpP04925 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.02■□□□□ -0
PrnpP04925 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.02■□□□□ -0
PrnpP04925 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.02■□□□□ -0
PrnpP04925 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.02■□□□□ -0
PrnpP04925 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.02■□□□□ -0
PrnpP04925 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PrnpP04925 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.02□□□□□ -0.01
PrnpP04925 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PrnpP04925 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PrnpP04925 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PrnpP04925 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PrnpP04925 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PrnpP04925 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms