Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
IghmP01872 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
IghmP01872 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
IghmP01872 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.65□□□□□ -0.22
IghmP01872 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
IghmP01872 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Gm17968-201ENSMUST00000194902 784 ntBASIC13.65□□□□□ -0.22
IghmP01872 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.65□□□□□ -0.22
IghmP01872 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Gm45747-201ENSMUST00000212203 999 ntBASIC13.65□□□□□ -0.22
IghmP01872 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.65□□□□□ -0.22
IghmP01872 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
IghmP01872 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
IghmP01872 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
IghmP01872 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
IghmP01872 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IghmP01872 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.64□□□□□ -0.23
IghmP01872 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Gm9385-201ENSMUST00000117563 472 ntBASIC13.64□□□□□ -0.23
IghmP01872 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.64□□□□□ -0.23
IghmP01872 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.64□□□□□ -0.23
IghmP01872 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.64□□□□□ -0.23
IghmP01872 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Gm45098-201ENSMUST00000207179 657 ntBASIC13.64□□□□□ -0.23
IghmP01872 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
IghmP01872 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IghmP01872 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IghmP01872 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.63□□□□□ -0.23
IghmP01872 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IghmP01872 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.63□□□□□ -0.23
IghmP01872 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IghmP01872 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
IghmP01872 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.63□□□□□ -0.23
IghmP01872 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
IghmP01872 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.63□□□□□ -0.23
IghmP01872 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.63□□□□□ -0.23
IghmP01872 Gm5479-201ENSMUST00000160578 435 ntBASIC13.63□□□□□ -0.23
IghmP01872 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.63□□□□□ -0.23
IghmP01872 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.63□□□□□ -0.23
IghmP01872 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IghmP01872 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IghmP01872 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IghmP01872 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IghmP01872 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
IghmP01872 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IghmP01872 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IghmP01872 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
IghmP01872 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms