Protein–RNA interactions for Protein: O55013

Trappc3, Trafficking protein particle complex subunit 3, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc3O55013 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.67■□□□□ 0.1
Trappc3O55013 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trappc3O55013 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.67■□□□□ 0.1
Trappc3O55013 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Gm43125-201ENSMUST00000201724 730 ntBASIC15.67■□□□□ 0.1
Trappc3O55013 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.67■□□□□ 0.1
Trappc3O55013 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Trappc3O55013 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.67■□□□□ 0.1
Trappc3O55013 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trappc3O55013 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trappc3O55013 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trappc3O55013 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trappc3O55013 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trappc3O55013 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.66■□□□□ 0.1
Trappc3O55013 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trappc3O55013 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.66■□□□□ 0.1
Trappc3O55013 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.66■□□□□ 0.1
Trappc3O55013 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.66■□□□□ 0.1
Trappc3O55013 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.66■□□□□ 0.1
Trappc3O55013 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trappc3O55013 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trappc3O55013 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trappc3O55013 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trappc3O55013 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.66■□□□□ 0.1
Trappc3O55013 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trappc3O55013 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.65■□□□□ 0.1
Trappc3O55013 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.65■□□□□ 0.1
Trappc3O55013 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Trappc3O55013 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.65■□□□□ 0.1
Trappc3O55013 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.65■□□□□ 0.1
Trappc3O55013 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trappc3O55013 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trappc3O55013 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms