Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm15131-201ENSMUST00000119124 595 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm6283-201ENSMUST00000182369 1000 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm5340-201ENSMUST00000203733 880 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 n-R5s195-201ENSMUST00000082891 119 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm14234-201ENSMUST00000119539 845 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm8365-201ENSMUST00000197334 648 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm44136-201ENSMUST00000203819 1106 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 AC154849.4-201ENSMUST00000224868 365 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm43294-201ENSMUST00000202850 2490 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm12419-201ENSMUST00000116649 636 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm21470-201ENSMUST00000187680 696 ntBASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm37812-201ENSMUST00000195216 2475 ntBASIC7.51□□□□□ -1.21
Ubr4A2AN08 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm45098-201ENSMUST00000207179 657 ntBASIC7.51□□□□□ -1.21
Ubr4A2AN08 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm15371-201ENSMUST00000117057 784 ntBASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm15593-201ENSMUST00000122085 1008 ntBASIC7.51□□□□□ -1.21
Ubr4A2AN08 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ubr4A2AN08 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm6335-201ENSMUST00000118081 1194 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm7816-201ENSMUST00000119884 1194 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm15542-201ENSMUST00000121585 1194 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms