Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16nA0A075B634 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Mir6982-201ENSMUST00000184354 68 ntBASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16nA0A075B634 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Gm27742-201ENSMUST00000184667 60 ntBASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16nA0A075B634 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16nA0A075B634 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Gm8097-201ENSMUST00000117903 829 ntBASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms