Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm18766-201ENSMUST00000189811 808 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm8515-201ENSMUST00000194852 576 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Gm8318-201ENSMUST00000182954 872 ntBASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col13a1Q9R1N9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col13a1Q9R1N9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms