Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.85□□□□□ -0.03
Trem2Q99NH8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.85□□□□□ -0.03
Trem2Q99NH8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.85□□□□□ -0.03
Trem2Q99NH8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.85□□□□□ -0.03
Trem2Q99NH8 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.85□□□□□ -0.03
Trem2Q99NH8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trem2Q99NH8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Gm6973-201ENSMUST00000117080 721 ntBASIC14.84□□□□□ -0.03
Trem2Q99NH8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Trem2Q99NH8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem2Q99NH8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem2Q99NH8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem2Q99NH8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gm45612-201ENSMUST00000211320 160 ntBASIC14.83□□□□□ -0.04
Trem2Q99NH8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem2Q99NH8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.82□□□□□ -0.04
Trem2Q99NH8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem2Q99NH8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem2Q99NH8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trem2Q99NH8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trem2Q99NH8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem2Q99NH8 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms