Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Gm23935-201ENSMUST00000102303 57 ntBASIC14.24□□□□□ -0.13
Msh4Q99MT2 Gm24270-201ENSMUST00000102326 57 ntBASIC14.24□□□□□ -0.13
Msh4Q99MT2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.24□□□□□ -0.13
Msh4Q99MT2 Gm24245-201ENSMUST00000157318 57 ntBASIC14.24□□□□□ -0.13
Msh4Q99MT2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.24□□□□□ -0.13
Msh4Q99MT2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.24□□□□□ -0.13
Msh4Q99MT2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.23□□□□□ -0.13
Msh4Q99MT2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Gm15427-201ENSMUST00000117288 531 ntBASIC14.23□□□□□ -0.13
Msh4Q99MT2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.23□□□□□ -0.13
Msh4Q99MT2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.23□□□□□ -0.13
Msh4Q99MT2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Msh4Q99MT2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh4Q99MT2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh4Q99MT2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms