Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Gm4804-201ENSMUST00000182234 999 ntBASIC17.91■□□□□ 0.46
RtcbQ99LF4 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.91■□□□□ 0.46
RtcbQ99LF4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.91■□□□□ 0.46
RtcbQ99LF4 Gm45331-201ENSMUST00000209868 554 ntBASIC17.91■□□□□ 0.46
RtcbQ99LF4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.91■□□□□ 0.46
RtcbQ99LF4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.9■□□□□ 0.46
RtcbQ99LF4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.9■□□□□ 0.46
RtcbQ99LF4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.9■□□□□ 0.46
RtcbQ99LF4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RtcbQ99LF4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RtcbQ99LF4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RtcbQ99LF4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RtcbQ99LF4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.89■□□□□ 0.45
RtcbQ99LF4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.89■□□□□ 0.45
RtcbQ99LF4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RtcbQ99LF4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.88■□□□□ 0.45
RtcbQ99LF4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RtcbQ99LF4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms