Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.1■□□□□ 0.01
Snx30Q8CE50 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snx30Q8CE50 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Gm27301-201ENSMUST00000184012 127 ntBASIC15.09■□□□□ 0.01
Snx30Q8CE50 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Gm44492-201ENSMUST00000197012 141 ntBASIC15.09■□□□□ 0.01
Snx30Q8CE50 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.09■□□□□ 0.01
Snx30Q8CE50 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.09■□□□□ 0.01
Snx30Q8CE50 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.09■□□□□ 0.01
Snx30Q8CE50 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Snx30Q8CE50 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snx30Q8CE50 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.08■□□□□ 0.01
Snx30Q8CE50 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snx30Q8CE50 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Snx30Q8CE50 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snx30Q8CE50 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.08■□□□□ 0
Snx30Q8CE50 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snx30Q8CE50 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snx30Q8CE50 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snx30Q8CE50 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.08■□□□□ 0
Snx30Q8CE50 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snx30Q8CE50 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snx30Q8CE50 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.08■□□□□ 0
Snx30Q8CE50 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.08■□□□□ 0
Snx30Q8CE50 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Snx30Q8CE50 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snx30Q8CE50 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.08■□□□□ 0
Snx30Q8CE50 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Snx30Q8CE50 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Snx30Q8CE50 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Snx30Q8CE50 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Snx30Q8CE50 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.07■□□□□ 0
Snx30Q8CE50 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Snx30Q8CE50 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.07■□□□□ 0
Snx30Q8CE50 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.07■□□□□ 0
Snx30Q8CE50 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snx30Q8CE50 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms