Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf220Q6PDX6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm13312-201ENSMUST00000119631 718 ntBASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm25016-201ENSMUST00000158399 131 ntBASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms