Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.4■□□□□ 0.54
Msh6P54276 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Msh6P54276 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Msh6P54276 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.4■□□□□ 0.54
Msh6P54276 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Msh6P54276 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Gm6266-201ENSMUST00000203844 806 ntBASIC18.4■□□□□ 0.54
Msh6P54276 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Msh6P54276 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Msh6P54276 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh6P54276 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.4■□□□□ 0.54
Msh6P54276 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msh6P54276 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msh6P54276 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Msh6P54276 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msh6P54276 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msh6P54276 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Msh6P54276 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.39■□□□□ 0.53
Msh6P54276 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Msh6P54276 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 BC001981-202ENSMUST00000191393 1545 ntBASIC18.39■□□□□ 0.53
Msh6P54276 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.39■□□□□ 0.53
Msh6P54276 Gm17150-201ENSMUST00000165577 381 ntBASIC18.39■□□□□ 0.53
Msh6P54276 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Msh6P54276 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.39■□□□□ 0.53
Msh6P54276 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Msh6P54276 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Msh6P54276 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.38■□□□□ 0.53
Msh6P54276 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Gm11918-201ENSMUST00000121660 179 ntBASIC18.38■□□□□ 0.53
Msh6P54276 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.38■□□□□ 0.53
Msh6P54276 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.38■□□□□ 0.53
Msh6P54276 Gm9899-201ENSMUST00000065519 555 ntBASIC18.38■□□□□ 0.53
Msh6P54276 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Msh6P54276 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Msh6P54276 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Msh6P54276 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.37■□□□□ 0.53
Msh6P54276 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.37■□□□□ 0.53
Msh6P54276 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.37■□□□□ 0.53
Msh6P54276 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Msh6P54276 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.37■□□□□ 0.53
Msh6P54276 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.37■□□□□ 0.53
Msh6P54276 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh6P54276 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms