Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk2P38575 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.81□□□□□ -0.36
Upk2P38575 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Upk2P38575 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk2P38575 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Upk2P38575 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Upk2P38575 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Upk2P38575 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Upk2P38575 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.81□□□□□ -0.36
Upk2P38575 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.81□□□□□ -0.36
Upk2P38575 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.81□□□□□ -0.36
Upk2P38575 Gm15483-201ENSMUST00000120338 456 ntBASIC12.81□□□□□ -0.36
Upk2P38575 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.81□□□□□ -0.36
Upk2P38575 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gm5479-201ENSMUST00000160578 435 ntBASIC12.81□□□□□ -0.36
Upk2P38575 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.81□□□□□ -0.36
Upk2P38575 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk2P38575 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.81□□□□□ -0.36
Upk2P38575 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.81□□□□□ -0.36
Upk2P38575 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk2P38575 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Upk2P38575 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Upk2P38575 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Upk2P38575 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Gm11779-201ENSMUST00000118541 368 ntBASIC12.8□□□□□ -0.36
Upk2P38575 Gm15467-201ENSMUST00000120582 445 ntBASIC12.8□□□□□ -0.36
Upk2P38575 Gm17271-201ENSMUST00000165535 355 ntBASIC12.8□□□□□ -0.36
Upk2P38575 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.8□□□□□ -0.36
Upk2P38575 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.8□□□□□ -0.36
Upk2P38575 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk2P38575 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Upk2P38575 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk2P38575 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upk2P38575 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk2P38575 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.79□□□□□ -0.36
Upk2P38575 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.79□□□□□ -0.36
Upk2P38575 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms