Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Carlr-201ENSMUST00000181515 2574 ntBASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfrsf1bP25119 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfrsf1bP25119 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Gm2810-201ENSMUST00000118681 990 ntBASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf1bP25119 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm38225-201ENSMUST00000194001 393 ntBASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm43474-201ENSMUST00000196415 774 ntBASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf1bP25119 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Olfr286-202ENSMUST00000205305 969 ntBASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms