Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFP11831 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.63■□□□□ 0.41
SRFP11831 FAM207CP-201ENST00000443486 507 ntBASIC17.63■□□□□ 0.41
SRFP11831 AC125807.1-201ENST00000483097 614 ntBASIC17.63■□□□□ 0.41
SRFP11831 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.63■□□□□ 0.41
SRFP11831 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
SRFP11831 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.63■□□□□ 0.41
SRFP11831 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SRFP11831 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.63■□□□□ 0.41
SRFP11831 AC243562.1-201ENST00000560672 389 ntBASIC17.63■□□□□ 0.41
SRFP11831 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFP11831 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.63■□□□□ 0.41
SRFP11831 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SRFP11831 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.63■□□□□ 0.41
SRFP11831 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.63■□□□□ 0.41
SRFP11831 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SRFP11831 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFP11831 AKAP8P1-201ENST00000434743 1349 ntBASIC17.63■□□□□ 0.41
SRFP11831 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SRFP11831 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFP11831 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRFP11831 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SRFP11831 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SRFP11831 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.62■□□□□ 0.41
SRFP11831 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFP11831 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SRFP11831 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFP11831 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.62■□□□□ 0.41
SRFP11831 HLA-J-202ENST00000469281 1241 ntBASIC17.62■□□□□ 0.41
SRFP11831 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.62■□□□□ 0.41
SRFP11831 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.62■□□□□ 0.41
SRFP11831 AL135744.1-201ENST00000565098 629 ntBASIC17.62■□□□□ 0.41
SRFP11831 RARRES2P8-201ENST00000566335 367 ntBASIC17.62■□□□□ 0.41
SRFP11831 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFP11831 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFP11831 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFP11831 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.62■□□□□ 0.41
SRFP11831 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.62■□□□□ 0.41
SRFP11831 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
SRFP11831 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.62■□□□□ 0.41
SRFP11831 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRFP11831 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.61■□□□□ 0.41
SRFP11831 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.61■□□□□ 0.41
SRFP11831 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 MIR661-201ENST00000384842 89 ntBASIC17.61■□□□□ 0.41
SRFP11831 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.61■□□□□ 0.41
SRFP11831 GPS2P2-201ENST00000430745 888 ntBASIC17.61■□□□□ 0.41
SRFP11831 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.61■□□□□ 0.41
SRFP11831 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.61■□□□□ 0.41
SRFP11831 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.61■□□□□ 0.41
SRFP11831 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.61■□□□□ 0.41
SRFP11831 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.61■□□□□ 0.41
SRFP11831 AC140878.1-201ENST00000565277 250 ntBASIC17.61■□□□□ 0.41
SRFP11831 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.61■□□□□ 0.41
SRFP11831 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SRFP11831 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SRFP11831 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRFP11831 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.6■□□□□ 0.41
SRFP11831 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
SRFP11831 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.6■□□□□ 0.41
SRFP11831 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SRFP11831 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.6■□□□□ 0.41
SRFP11831 RBPMS2P1-201ENST00000437762 623 ntBASIC17.6■□□□□ 0.41
SRFP11831 GAPDHP21-201ENST00000450301 1010 ntBASIC17.6■□□□□ 0.41
SRFP11831 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SRFP11831 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRFP11831 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms